• All motifs sorted by activity significance
• All samples sorted alphabetically

• Activities table
• Activity deltas table
• Regulatory interactions
• Motifs sorted by significance (text)

Motif ID: RXRA_VDR{dimer}.p2

Z-value: 1.042

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Top targets:

Promoter	Score	Refseq	Gene Symbol	Gene Name
chr11_+_87391881	17.927		Sept4	septin 4
chr9_-_37360141	16.715	NM_022029	Nrgn	neurogranin
chr2_+_30219837	14.216	NM_175392	Fam73b	family with sequence similarity 73, member B
chr12_+_4082739	13.634		Dnajc27	DnaJ (Hsp40) homolog, subfamily C, member 27
chr6_-_11857434	13.119	NM_010886	Ndufa4	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4
chr1_+_78306890	12.951	NM_001004173	Sgpp2	sphingosine-1-phosphate phosphotase 2
chr15_+_82105322	12.329	NM_011889	Sept3	septin 3
chr2_+_30219752	11.341		Fam73b	family with sequence similarity 73, member B
chr3_-_107499129	11.326		Ahcyl1	S-adenosylhomocysteine hydrolase-like 1
chr2_+_144425688	10.836	NM_025314	Dtd1	D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)
chr7_-_148615247	10.505	NM_021316	Cend1	cell cycle exit and neuronal differentiation 1
chr12_+_4082573	10.276	NM_153082	Dnajc27	DnaJ (Hsp40) homolog, subfamily C, member 27
chr7_+_30074296	10.032	NM_026731	Ppp1r14a	protein phosphatase 1, regulatory (inhibitor) subunit 14A
chr2_+_144425632	9.999		Dtd1	D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)
chr9_+_121206613	9.919		Trak1	trafficking protein, kinesin binding 1
chr14_-_31736727	9.904	NM_008407	Itih3	inter-alpha trypsin inhibitor, heavy chain 3
chr7_+_5031809	9.888	NM_010147	Epn1	epsin 1
chr1_-_25886551	9.563	NM_175642	Bai3	brain-specific angiogenesis inhibitor 3
chr4_+_122860705	9.524	NM_174998	Hpcal4	hippocalcin-like 4
chr7_-_125676808	9.061		Coq7	demethyl-Q 7
chr11_-_116274124	8.802		Rnf157	ring finger protein 157
chr2_+_144425704	8.757		Dtd1	D-tyrosyl-tRNA deacylase 1 homolog (S. cerevisiae)
chr9_+_108838660	8.100	NM_025407	Uqcrc1	ubiquinol-cytochrome c reductase core protein 1
chr7_-_125676823	7.856	NM_009940	Coq7	demethyl-Q 7
chr11_-_69418965	7.845		Atp1b2	ATPase, Na+/K+ transporting, beta 2 polypeptide
chrX_-_47141382	7.838	NM_183336	Igsf1	immunoglobulin superfamily, member 1
chr17_-_57184507	7.815		Slc25a23	solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 23
chr6_+_125165597	7.733	NM_001080557 NM_009496	Vamp1	vesicle-associated membrane protein 1
chr1_+_93076578	7.419		Ramp1	receptor (calcitonin) activity modifying protein 1
chr7_-_125676764	7.366		Coq7	demethyl-Q 7
chr11_+_6295127	7.362	NM_001005867	Zmiz2	zinc finger, MIZ-type containing 2
chr5_-_23948000	7.233
chr7_-_52184801	6.820		Ap2a1	adaptor protein complex AP-2, alpha 1 subunit
chr8_-_124102548	6.796	NM_133765	Fbxo31	F-box protein 31
chr2_-_174289569	6.442	NM_025983	Atp5e	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
chr18_-_74224541	6.439	NM_172632	Mapk4	mitogen-activated protein kinase 4
chr7_+_148247172	6.196	NM_177897	B4galnt4	beta-1,4-N-acetyl-galactosaminyl transferase 4
chr4_-_11893500	5.980	NM_001033453 NM_001098230	Pdp1	pyruvate dehyrogenase phosphatase catalytic subunit 1
chr7_-_52184840	5.903	NM_001077264 NM_007458	Ap2a1	adaptor protein complex AP-2, alpha 1 subunit
chr7_-_52184789	5.889		Ap2a1	adaptor protein complex AP-2, alpha 1 subunit
chr7_+_19661811	5.841		Dmwd	dystrophia myotonica-containing WD repeat motif
chr1_-_195196423	5.789	NM_144817	Camk1g	calcium/calmodulin-dependent protein kinase I gamma
chr17_-_45823086	5.755		Tmem63b	transmembrane protein 63b
chr2_-_174289526	5.552		Atp5e	ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit
chr3_-_40650624	5.443	NM_028140	Mfsd8	major facilitator superfamily domain containing 8
chr5_-_45841351	5.402		Qdpr	quinoid dihydropteridine reductase
chr1_-_95531961	5.308		Stk25	serine/threonine kinase 25 (yeast)
chr5_-_45841382	5.297	NM_024236	Qdpr	quinoid dihydropteridine reductase
chr13_+_13876667	5.266	NM_010317	Gng4	guanine nucleotide binding protein (G protein), gamma 4
chr14_-_52533114	5.210	NM_001145959 NM_013864	Ndrg2	N-myc downstream regulated gene 2
chr3_-_116671573	5.019		Palmd	palmdelphin
chr2_+_28048779	4.963		Olfm1	olfactomedin 1
chr10_+_127795461	4.925		Cs	citrate synthase
chr3_-_115417847	4.859		S1pr1	sphingosine-1-phosphate receptor 1
chr9_-_29219382	4.856		Ntm	neurotrimin
chr14_-_52533039	4.823		Ndrg2	N-myc downstream regulated gene 2
chr3_-_144695718	4.817	NM_017474	Clca3	chloride channel calcium activated 3
chr10_+_79167102	4.663	NM_001077184 NM_009768	Bsg	basigin
chr2_+_71819264	4.659	NM_019688	Rapgef4	Rap guanine nucleotide exchange factor (GEF) 4
chr11_-_120673433	4.645		Fasn	fatty acid synthase
chr7_-_31230564	4.629		Aplp1	amyloid beta (A4) precursor-like protein 1
chr7_-_52184752	4.619		Ap2a1	adaptor protein complex AP-2, alpha 1 subunit
chr3_-_115417685	4.485		S1pr1	sphingosine-1-phosphate receptor 1
chr15_+_57817333	4.483	NM_173862	Fam83a	family with sequence similarity 83, member A
chr15_+_82105647	4.459		Sept3	septin 3
chr3_+_117278144	4.403	NM_029425	4833424O15Rik	RIKEN cDNA 4833424O15 gene
chr9_+_57369014	4.400	NM_007747	Cox5a	cytochrome c oxidase, subunit Va
chr14_-_52532988	4.338		Ndrg2	N-myc downstream regulated gene 2
chr19_-_36811137	4.284		Ppp1r3c	protein phosphatase 1, regulatory (inhibitor) subunit 3C
chr19_-_36811090	4.082	NM_016854	Ppp1r3c	protein phosphatase 1, regulatory (inhibitor) subunit 3C
chr5_+_37633317	4.036	NM_001136058	Crmp1	collapsin response mediator protein 1
chr9_-_29219306	3.992		Ntm	neurotrimin
chr3_-_152331083	3.904	NM_001081277	Ak5	adenylate kinase 5
chr7_-_31230577	3.891	NM_007467	Aplp1	amyloid beta (A4) precursor-like protein 1
chr4_+_147534729	3.767		Fbxo2	F-box protein 2
chr4_+_13670425	3.736	NM_001111026	Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr7_+_133415982	3.664	NM_145587	Sbk1	SH3-binding kinase 1
chr7_-_91754236	3.590		Fah	fumarylacetoacetate hydrolase
chr2_+_28048511	3.579		Olfm1	olfactomedin 1
chr7_-_91754314	3.541		Fah	fumarylacetoacetate hydrolase
chr17_+_35068258	3.529		Neu1	neuraminidase 1
chr5_-_8622882	3.517	NM_198620	Rundc3b	RUN domain containing 3B
chr5_-_31504348	3.479	NM_001177901	Zfp513	zinc finger protein 513
chr11_-_120442448	3.384		Arhgdia	Rho GDP dissociation inhibitor (GDI) alpha
chr5_+_37633353	3.375		Crmp1	collapsin response mediator protein 1
chr17_+_57129686	3.341	NM_017393	Clpp	caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog (E. coli)
chr18_-_75857207	3.328	NM_201354	Ctif	CBP80/20-dependent translation initiation factor
chr11_+_68902025	3.255	NM_009497	Vamp2	vesicle-associated membrane protein 2
chr11_+_68901989	3.244		Vamp2	vesicle-associated membrane protein 2
chr4_+_42930076	3.037	NM_172690	N28178	expressed sequence N28178
chr1_-_16509276	3.024	NM_001111272 NM_025303	Stau2	staufen (RNA binding protein) homolog 2 (Drosophila)
chr10_+_127472725	3.005		Naca	nascent polypeptide-associated complex alpha polypeptide
chr7_-_88599560	3.003	NM_007755	Cpeb1	cytoplasmic polyadenylation element binding protein 1
chr11_+_55017825	3.002	NM_153139	Slc36a1	solute carrier family 36 (proton/amino acid symporter), member 1
chr7_+_80885175	2.978	NM_001162532	Fam174b	family with sequence similarity 174, member B
chr11_+_4886860	2.928	NM_007454	Ap1b1	adaptor protein complex AP-1, beta 1 subunit
chr4_-_140221801	2.927	NM_001112722	Arhgef10l	Rho guanine nucleotide exchange factor (GEF) 10-like
chr2_-_80287218	2.901		Frzb	frizzled-related protein
chr10_+_127472624	2.887		Naca	nascent polypeptide-associated complex alpha polypeptide
chr8_-_105308910	2.865	NM_009866	Cdh11	cadherin 11
chr9_+_57369044	2.833		Cox5a	cytochrome c oxidase, subunit Va
chr4_+_42929523	2.806		N28178	expressed sequence N28178
chr7_+_19868009	2.784	NM_013648	Rtn2	reticulon 2 (Z-band associated protein)
chr2_-_117168706	2.729		Rasgrp1	RAS guanyl releasing protein 1
chr10_+_80085486	2.686	NM_134002	Csnk1g2	casein kinase 1, gamma 2
chr19_-_7016916	2.683	NM_001177361	Gpr137	G protein-coupled receptor 137
chr3_-_108339375	2.656	NM_001033304	5330417C22Rik	RIKEN cDNA 5330417C22 gene
chr8_+_4253079	2.654	NM_133968	Snapc2	small nuclear RNA activating complex, polypeptide 2
chr5_+_116295259	2.652		Cit	citron
chr19_-_6077175	2.598	NM_001081041	1110014N23Rik	RIKEN cDNA 1110014N23 gene
chrX_+_7455387	2.573	NM_138606	Pim2	proviral integration site 2
chr13_-_14155631	2.520	NM_010282	Ggps1	geranylgeranyl diphosphate synthase 1
chr17_-_45686604	2.435	NM_001013749	Tmem151b	transmembrane protein 151B
chr2_-_73224394	2.426	NM_001080707 NM_001190297	Gpr155	G protein-coupled receptor 155
chr8_-_28340059	2.422	NM_013462	Adrb3	adrenergic receptor, beta 3
chr6_-_85452851	2.286	NM_001001160	Fbxo41	F-box protein 41
chr4_-_117587421	2.267	NM_146152	Ipo13	importin 13
chr11_+_75300278	2.188	NM_138659	Prpf8	pre-mRNA processing factor 8
chr16_+_18066571	2.180		Dgcr6	DiGeorge syndrome critical region gene 6
chr16_+_18066494	2.149		Dgcr6	DiGeorge syndrome critical region gene 6
chr11_+_3414983	2.125		Selm	selenoprotein M
chrX_-_61530035	2.114		Slitrk4	SLIT and NTRK-like family, member 4
chr8_+_96676506	2.084	NM_013603	Mt3	metallothionein 3
chr13_-_14155541	2.079		Ggps1	geranylgeranyl diphosphate synthase 1
chr18_+_37098858	2.050	NM_198117	Pcdha2	protocadherin alpha 2
chr5_-_124666426	2.025	NM_011256	Pitpnm2	phosphatidylinositol transfer protein, membrane-associated 2
chr2_+_164312087	1.988		Dbndd2	dysbindin (dystrobrevin binding protein 1) domain containing 2
chr1_-_186823350	1.976	NM_145515	Mark1	MAP/microtubule affinity-regulating kinase 1
chr3_+_88987108	1.967	NM_001014995	Fam189b	family with sequence similarity 189, member B
chr2_+_128524597	1.952	NM_008587	Mertk	c-mer proto-oncogene tyrosine kinase
chr2_+_28048592	1.946	NM_001038613 NM_001038614	Olfm1	olfactomedin 1
chr7_+_133968166	1.936	NM_001146347	Fam57b	family with sequence similarity 57, member B
chr7_+_133416177	1.901		Sbk1	SH3-binding kinase 1
chr15_+_12251184	1.875		Golph3	golgi phosphoprotein 3
chr2_+_181255209	1.875	NM_016775	Dnajc5	DnaJ (Hsp40) homolog, subfamily C, member 5
chr19_-_4906607	1.861	NM_001033128	Bbs1	Bardet-Biedl syndrome 1 (human)
chr4_-_147533696	1.859	NM_001161851	Fbxo44	F-box protein 44
chr5_-_31456576	1.857	NM_008622	Mpv17	MpV17 mitochondrial inner membrane protein
chr4_+_13670582	1.840		Runx1t1	runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
chr11_+_3414884	1.818		Selm	selenoprotein M
chr8_-_73132125	1.794	NM_133772	Ssbp4	single stranded DNA binding protein 4
chr17_-_24826873	1.770	NM_011522	Syngr3	synaptogyrin 3
chr10_-_77707385	1.745	NM_001081055	Trappc10	trafficking protein particle complex 10
chr11_+_75323840	1.711		Rilp	Rab interacting lysosomal protein
chr7_-_129245303	1.703	NM_028177	Ndufab1	NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
chr1_-_24012436	1.682	NM_026503	1110058L19Rik	RIKEN cDNA 1110058L19 gene
chr12_+_77866520	1.663	NM_206534	Churc1	churchill domain containing 1
chr9_+_57351848	1.637	NM_133982	Rpp25	ribonuclease P 25 subunit (human)
chr13_+_19040215	1.634	NM_175007	Amph	amphiphysin
chr5_+_107926763	1.608	NM_001007574 NM_001168557	A830010M20Rik	RIKEN cDNA A830010M20 gene
chr19_+_8911956	1.599	NM_001136064	Bscl2	Bernardinelli-Seip congenital lipodystrophy 2 homolog (human)
chr5_-_114881393	1.558
chr9_+_57351830	1.533		Rpp25	ribonuclease P 25 subunit (human)
chr8_-_86671651	1.525	NM_145970	Cc2d1a	coiled-coil and C2 domain containing 1A
chr2_+_26483976	1.520	NM_019833	Fam69b	family with sequence similarity 69, member B
chr10_+_19868725	1.495	NM_001198635 NM_008635	Mtap7	microtubule-associated protein 7
chr7_+_13507659	1.491	NM_009095	Rps5	ribosomal protein S5
chr1_-_173177243	1.479		Ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2
chr1_-_173177242	1.467	NM_153064	Ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2
chr7_-_3629631	1.440		Mboat7	membrane bound O-acyltransferase domain containing 7
chr18_-_13100228	1.438	NM_207530	Osbpl1a	oxysterol binding protein-like 1A
chr8_-_73030643	1.437		2810428I15Rik	RIKEN cDNA 2810428I15 gene
chr1_-_173177236	1.433		Ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2
chr5_-_44492908	1.431	NM_001163577 NM_008935	Prom1	prominin 1
chr5_-_101103051	1.428	NM_027978	Coq2	coenzyme Q2 homolog, prenyltransferase (yeast)
chr1_+_39251056	1.421	NM_008719	Npas2	neuronal PAS domain protein 2
chr19_-_6984433	1.414		Prdx5	peroxiredoxin 5
chr16_-_84835812	1.410	NM_016755	Atp5j	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit F
chr15_+_99556127	1.404		2310016M24Rik	RIKEN cDNA 2310016M24 gene
chr10_+_79179326	1.393	NM_008226	Hcn2	hyperpolarization-activated, cyclic nucleotide-gated K+ 2
chr3_+_88425073	1.377		Arhgef2	rho/rac guanine nucleotide exchange factor (GEF) 2
chr2_+_174167172	1.375		Gnas	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
chr10_-_53470714	1.375	NM_001081428	Fam184a	family with sequence similarity 184, member A
chr15_+_99556048	1.355	NM_183256	2310016M24Rik	RIKEN cDNA 2310016M24 gene
chr4_-_124527811	1.351	NM_001142727	1110065P20Rik	RIKEN cDNA 1110065P20 gene
chr16_+_32271553	1.316	NM_183283	2310010M20Rik	RIKEN cDNA 2310010M20 gene
chr3_-_129763586	1.294		Sec24b	Sec24 related gene family, member B (S. cerevisiae)
chr5_+_136363914	1.275		Hspb1	heat shock protein 1
chr5_+_116295664	1.272	NM_007708	Cit	citron
chr11_-_96805259	1.269		Pnpo	pyridoxine 5'-phosphate oxidase
chr8_-_73030573	1.268	NM_025577	2810428I15Rik	RIKEN cDNA 2810428I15 gene
chr1_-_127808790	1.247	NM_145100	Lypd1	Ly6/Plaur domain containing 1
chr1_-_173177232	1.242		Ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2
chr2_+_3035692	1.235		Fam171a1	family with sequence similarity 171, member A1
chr15_-_101966611	1.190	NM_001033277	Spryd3	SPRY domain containing 3
chr10_+_98377759	1.184	NM_026482	Atp2b1	ATPase, Ca++ transporting, plasma membrane 1
chr19_-_29101759	1.165
chr8_+_97501008	1.164	NM_001198894	Gpr56	G protein-coupled receptor 56
chr1_-_173177227	1.157		Ndufs2	NADH dehydrogenase (ubiquinone) Fe-S protein 2
chr5_-_124545776	1.137	NM_019875	Abcb9	ATP-binding cassette, sub-family B (MDR/TAP), member 9
chr9_-_117539030	1.135	NM_001172121	Rbms3	RNA binding motif, single stranded interacting protein
chr8_-_47296201	1.119	NM_007450	Slc25a4	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 4
chr7_-_52271450	1.118	NM_001008422	Scaf1	SR-related CTD-associated factor 1
chr11_-_96805294	1.114	NM_134021	Pnpo	pyridoxine 5'-phosphate oxidase
chr5_+_121847967	1.097	NM_172722	Naa25	N(alpha)-acetyltransferase 25, NatB auxiliary subunit
chr5_-_36928872	1.091	NM_001113362	Tbc1d14	TBC1 domain family, member 14
chr5_+_74591336	1.060	NM_026878	Rasl11b	RAS-like, family 11, member B
chr10_-_13272820	1.054		Pex3	peroxisomal biogenesis factor 3
chr12_+_112812710	1.051	NM_021516 NM_022801	Mark3	MAP/microtubule affinity-regulating kinase 3
chr5_+_74591290	1.047		Rasl11b	RAS-like, family 11, member B

Gene overrepresentation in process category:

Enrichment	P-value	GO Accession	GO Term
37.63	1.68e-03	GO:0006743	ubiquinone metabolic process
37.63	1.68e-03	GO:0006744	ubiquinone biosynthetic process
30.79	4.32e-03	GO:0045426	quinone cofactor biosynthetic process
1.80	7.35e-03	GO:0051234	establishment of localization
1.80	9.64e-03	GO:0006810	transport
24.19	1.28e-02	GO:0042375	quinone cofactor metabolic process

Gene overrepresentation in compartment category:

Enrichment	P-value	GO Accession	GO Term
1.44	7.52e-11	GO:0005622	intracellular
1.59	1.89e-10	GO:0005737	cytoplasm
1.41	6.70e-09	GO:0044424	intracellular part
1.73	2.94e-08	GO:0044444	cytoplasmic part
1.22	8.55e-07	GO:0005623	cell
1.22	8.55e-07	GO:0044464	cell part
1.35	2.26e-04	GO:0043229	intracellular organelle
1.35	2.74e-04	GO:0043226	organelle
2.14	2.33e-03	GO:0005739	mitochondrion
1.34	5.09e-03	GO:0043227	membrane-bounded organelle
1.33	7.92e-03	GO:0043231	intracellular membrane-bounded organelle
3.58	7.93e-03	GO:0019866	organelle inner membrane
3.51	1.85e-02	GO:0005743	mitochondrial inner membrane
2.84	3.49e-02	GO:0045202	synapse

Nothing significant found in function category.